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Name: Eqtl database
File size: 610mb
Uses of the exSNP database: Query - eQTL datasets: To query if the SNPs of interest are involved in eQTLs in tissues from 16 publicly available human eQTL . Expression quantitative trait loci (eQTL) are genetic variations that affect gene expression. Several eQTL databases have been created to allow. Browse eQTL Tissues. Total samples in all eQTL tissues: Documentation: Publication Policy GTEx IGV eQTL Browser. GTEx Gene-eQTL Visualizer.
The GTEx eQTL database and browser aims to provide a central resource to archive and display association between genetic variation and high-throughput. In order to study the function of SNPs, I am looking for downloadable eQTL databases. So far I have only found GTEX from NCBI. Are there other sources for . A cross-platform catalogue of expression quantitative trait loci derived from lymphoblastoid cell lines. This website provides genome-wide significant cis and .
I only have data from the following rather early larger-scale eQTL papers and the occasional eQTL information from GWAS papers pertinent to. Summary: seeQTL is a comprehensive and versatile eQTL database, including various eQTL studies and a meta-analysis of HapMap eQTL. Association Test. Clear. QTL Type: Any, eQTL, methQTL, mirQTL. log10(p-value) 2 value >. Any, , , , , , , Expression quantitative trait locus (eQTL) analysis, which links variations in However, no database comprehensively provides eQTLs in large.